In the pan-genome construction, several software was combined. Each software had advantage and limitation. If you do like to use the data in your research, we strongly suggest you to combine the results of whole-genome alignment, pan-genome graph, SVs based on the reference genome and the blast tools to see the real details of the candidate region. All data is available in the present website.

When using the information of the dataset, please cite the rice super pan-genome paper, as Shang, L., Li, X., He, H. et al. A super pan-genomic landscape of rice. Cell Research (2022).